Computational Medical Imaging Toolkit (COMEDI)
COMEDI is a free library for mainly computational neuroimaging, includes sMRI, dMRI, etc. It is written mainly in MATLAB, also written in Python and Shell into part codes. It does this by taking a fully modular technology. Using COMEDI you can design, fit, track, analysis and recover the parameters of some diffusion model is usually simply using command-line. These methods are designed for single-/multi-shell acquisition schemes, usually can be used directly with no additional toolbox needed. COMEDI is for research only; please do not use results from COMEDI for clinical decisions. COMEDI implements a complete pipeline from pre-processing to post-processing then analysis results, most of the algorithms generalize the state-of-the-art technology to achieve robust analysis with fewer assumptions.